Center for Eukaryotic Gene Regulation | Center for Comparative Genomics and Bioinformatics | Huck Institutes
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psumarkThe  Genome Cartography Project is a collaboration between Penn State's Center for Eukaryotic Gene Regulation and Center for Comparative Genomics and Bioinformatics to map DNA sequence features, protein-nucleic acid interactions, and other information to the genomes of model organisms, and present that information in a visually cognitive way that provides a discovery pathway for biological knowledge.

hiring See the Research Team

Current Projects

reference_map

A compiled and systematic reference map of nucleosome positions across the Saccharomyces genome

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drosophila

Nucleosome maps of the Drosophila genome
yeast

Nucleosome maps of the Saccharomyces genome

 

Software Projects

We combine agile software development methodologies with the latest advances in computational infrastructure management. Using Amazon's Elastic Compute Cloud, Simple Storage Service and Google's Application Engine we aim to build a low cost, efficient and scalable infrastructure that can handle the scientific data analysis and visualization challenges of the bioinformatics era.

chromatinGeneTrack is our bioinformatics software package for storing, querying and visualizing interval oriented data.

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Updated on November 9, 2009